Get and set iPubs.

Get and set the iPubs data.frame in an object of ISA.

Usage

iPubs(x)

iPubs(x) <- value

# S4 method for ISA
iPubs(x)

# S4 method for ISA
iPubs(x) <- value

Arguments

x

An object of class ISA.

value

A data.frame containing the investigation publications information. A data.frame in which at least the following columns are present: 'Investigation PubMed ID', 'Investigation Publication DOI', 'Investigation Publication Author List', 'Investigation Publication Title', 'Investigation Publication Status', 'Investigation Publication Status Term Accession Number', 'Investigation Publication Status Term Source REF'.

Value

A data.frame containing the investigation publications information.

The updated object of class ISA.

Examples

## Read example Atwell data set.
isaObject1 <- readISATab(path = file.path(system.file("extdata/Atwell",
                                          package = "isatabr")))

## Extract iPubs data.frame.
iPubs(isaObject1)
#>   Investigation PubMed ID Investigation Publication DOI
#> 1                20336072           10.1038/nature08800
#>   Investigation Publication Author List
#> 1                        Susanna Atwell
#>                                                        Investigation Publication Title
#> 1 Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines
#>   Investigation Publication Status
#> 1                        Published
#>   Investigation Publication Status Term Accession Number
#> 1                   http://www.ebi.ac.uk/efo/EFO_0001794
#>   Investigation Publication Status Term Source REF
#> 1                                              EFO