Summary function for the class QTLMPP
summary.QTLMPP.Rd
Gives a summary for an object of S3 class QTLMPP
.
Usage
# S3 method for class 'QTLMPP'
summary(object, ...)
Examples
if (FALSE) { # \dontrun{
## Read phenotypic data.
pheno <- read.delim(system.file("extdata/multipop", "AxBxCpheno.txt",
package = "statgenMPP"))
## Rename first column to genotype.
colnames(pheno)[1] <- "genotype"
## Compute IBD probabilities for simulated population - AxB, AxC.
ABC <- calcIBDMPP(crossNames = c("AxB", "AxC"),
markerFiles = c(system.file("extdata/multipop", "AxB.txt",
package = "statgenMPP"),
system.file("extdata/multipop", "AxC.txt",
package = "statgenMPP")),
pheno = pheno,
popType = "F4DH",
mapFile = system.file("extdata/multipop", "mapfile.txt",
package = "statgenMPP"),
evalDist = 5)
## Multi-QTL Mapping.
ABC_MQM <- selQTLMPP(ABC, trait = "yield")
## Print summary.
summary(ABC_MQM)
} # }