Function reference • statgenMPP

IBD calculations

calcIBDMPP(): IBD calculation for multi parental populations

readRABBITMPP(): Read IBD probabilities

createGDataMPP(): Create an object of class gDataMPP

plot(<gDataMPP>): Plot function for the class gDataMPP

summary(<gDataMPP>): Summary function for the class gDataMPP

QTL Mapping

selQTLMPP(): Multi round genome scans for QTL detection

summary(<QTLMPP>): Summary function for the class QTLMPP

print(<summary.QTLMPP>): Print summary of object of class summary.QTLMPP

plot(<QTLMPP>): Plot function for the class QTLMPP

kinshipIBD(): Compute kinship matrix for IBD probabilities

Data

barleyPheno: Phenotypic data for awn length in barley

maizeSQM: Pre-computed SQM output maize

maizeMQM: Pre-computed MQM output maize

barleyMQM: Pre-computed MQM output barley