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Plot function for class stability

Source: R/createStability.R
plot.stability.Rd

Function for creating scatter plots of the square roots of the computed stability measures against the means.

Usage

# S3 method for class 'stability'
plot(
  x,
  ...,
  colorGenoBy = NULL,
  colGeno = NULL,
  title = paste("Stability coefficients for", x$trait),
  output = TRUE
)

Arguments

x

An object of class stability.

...

Not used.

colorGenoBy

A character string indicating a column in the TD used as input for the stability analysis by which the genotypes should be colored. If NULL all genotypes will be colored black.

colGeno

A character vector with plot colors for the genotypes. A single color when colorGenoBy = NULL, a vector of colors otherwise.

title

A character string used a title for the plot.

output

Should the plot be output to the current device? If FALSE only a list of ggplot objects is invisibly returned.

Value

A list of ggplot object is invisibly returned.

See also

Other stability: gxeStability(), report.stability()

Examples

## Compute three stability measures for TDMaize.
geStab <- gxeStability(TD = TDMaize, trait = "yld")

## Create scatter plots of the computed stability measures against the means.
plot(geStab)