Package index
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gxeVarComp()
- Mixed model analysis of GxE table of means
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plot(<varComp>)
- Plot function for class varComp
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predict(<varComp>)
- Predictions based on a fitted varComp model.
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vc()
- Extract variance components
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herit()
- Calculate heritability
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CRDR()
- Calculate the correlated response to selection
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correlations()
- Compute different types of correlations.
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diagnostics()
- Get diagnostics for an object of class varComp
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gxeFw()
- Finlay-Wilkinson analysis
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plot(<FW>)
- Plot function for class FW
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report(<FW>)
- Report method for class FW
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fitted(<FW>)
- Extract fitted values.
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residuals(<FW>)
- Extract residuals.
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gxeAmmi()
- AMMI analysis
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plot(<AMMI>)
- Plot function for class AMMI
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report(<AMMI>)
- Report method for class AMMI
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fitted(<AMMI>)
- Extract fitted values.
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residuals(<AMMI>)
- Extract residuals.
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gxeGGE()
- GGE analysis
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gxeMegaEnv()
- Form mega environments based on fitted values from an AMMI model
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plot(<megaEnv>)
- Plot function for class megaEnv
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predict(<megaEnv>)
- Compute BLUPS based on a set of mega environments
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gxeStability()
- Calculate stability coefficients for genotype-by-environment data
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plot(<stability>)
- Plot function for class stability
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report(<stability>)
- Report method for class stability
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gxeVarCov()
- Selects the best variance-covariance model for a set of trials
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plot(<varCov>)
- Plot function for class varCov
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report(<varCov>)
- Report method for class varCov
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fitted(<varCov>)
- Extract fitted values.
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residuals(<varCov>)
- Extract residuals.
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dropsPheno
- DROPS data set
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TDMaize
- Field data for a maize experiment in Tlaltizapan, Mexico
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multMissing()
- Estimate missing values in multivariate data